PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g295530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 222aa    MW: 24946.7 Da    PI: 10.0176
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g295530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.10.000371722081354
                       HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       R+++++    Lr ++P  +       ++ +++L +Av+Y+ksL
  Pd.00g295530.m01 172 RQKMKKMVRVLRGIVPGgN------EMNTVDVLDEAVQYLKSL 208
                       7889999999999999855......8***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MNIGVTFKRY RAIKEVGKII MSVGVIAYYQ LMQVCQAEYF RQLLKPVTQL SCTRMRDQQF  60
DPNKAAPPFA NQVGNNYMHI PVASARGAVL PHEAKHIKPF HGVEFQTSDI CPKNFIIFDQ  120
TDHRTRTHGN YGSMSPDSCS NYGLKTKKNR QCSSLGKSSG IGSSSCNSER KRQKMKKMVR  180
VLRGIVPGGN EMNTVDVLDE AVQYLKSLKV ELQNLGVENL ND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.19e-13bHLH family protein