PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g296740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 130aa    MW: 14434.3 Da    PI: 7.342
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g296740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26065.99.7e-2162121160
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamss 60 
                       aCa+Ck +rr+C + C +apyfpa++ ++f+n+hk+FG+ n++k+++ + +++r++a+++
  Pd.00g296740.m01  62 ACASCKQQRRECDETCEMAPYFPASRYSEFQNAHKIFGVINIQKIMAMAAPDQRQAAAEA 121
                       7*******************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MDARVFRAVV LTSMLVLAIA QADINPSYTN AIPNGNTLGQ ADDAFDPSNT NHVVPNGHRC  60
IACASCKQQR RECDETCEMA PYFPASRYSE FQNAHKIFGV INIQKIMAMA APDQRQAAAE  120
AFSRRERQEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.11e-15LBD family protein