PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g297610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 169aa    MW: 19101.7 Da    PI: 4.4675
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g297610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB765.7e-2424106385
             NF-YB   3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 
                       ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al  lGf +y+e++  
  Pd.00g297610.m01  24 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCSREEKRTIAPEHVLKALQVLGFSEYIEEVYS 106
                       6899**************************************************************************98754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MKNDTESTFI CFRMEPMDII GKSKEDASLP KATMTKIIKE MLPPDVRVAR DAQDLLIECC  60
VEFINLISSE SNEVCSREEK RTIAPEHVLK ALQVLGFSEY IEEVYSAYEQ HKLETMHDLA  120
KSVKWGNGAE MTEEEALAEQ QRMFAEARAR MNGGATAPKQ PDPEQSLES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.21e-94NF-YB family protein