PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g299960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 709aa    MW: 78217.8 Da    PI: 6.7209
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g299960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.37.4e-202479156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ +++t++q++ Le +F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  Pd.00g299960.m01 24 KKRYHRHTANQIQKLEGMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 79
                      678899***********************************************998 PP
2START179.22.4e-562234472206
                       HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGG...CT-TT-SEEEE CS
             START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddke...qWdetlakaet 81 
                       +a  a++el+++ + +ep+W ks+    + +n + + ++f+++++       ++ea+r+sgvv+m+   lve ++d ++    + + +  a+t
  Pd.00g299960.m01 223 IAANAMEELLRLLQTNEPLWIKSAtdgrDVLNLESYERIFPRANShlknpnLRIEASRDSGVVIMNGLALVEMFMDPNKfgeLFPTIVSMAKT 315
                       67889*********************9999**********99999*********************************77777777777**** PP

                       EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
             START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167
                       +evissg      g lqlm+ elq+lspl+  R+f+f+Ry++q ++g+w+ivdvS d +++++   +  R+++lpSg+li++++ng+skv wv
  Pd.00g299960.m01 316 IEVISSGmlgsqsGSLQLMYKELQVLSPLAQtREFYFLRYCQQIEQGQWAIVDVSYDFPRDNQ-FTNQCRSHRLPSGCLIQDMPNGYSKVSWV 407
                       **************************************************************9.7999************************* PP

                       E-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 168 ehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                       ehv+ +++ p h l+r l++sgla+ga +w+a+lqr ce+
  Pd.00g299960.m01 408 EHVEIEDKAPtHRLYRDLIHSGLAFGAERWLAALQRMCER 447
                       **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MEFGSGGGAG SGGDHDASDS QRRKKRYHRH TANQIQKLEG MFKECPHPDE KQRLQLSREL  60
GLAPRQIKFW FQNRRTQMKA QHERADNCAL RAENDKIRCE NIAIREALKN VICPACGVPP  120
LNEDSYFDEH KLRMENAQLK EELDRVSSIA AKCIGRPISQ LPPVQPIHVS SLELSMASFG  180
GHGVGGPSLD LDLLPGTTSS TMPSLPYHPT VLSDMDKSLM TDIAANAMEE LLRLLQTNEP  240
LWIKSATDGR DVLNLESYER IFPRANSHLK NPNLRIEASR DSGVVIMNGL ALVEMFMDPN  300
KFGELFPTIV SMAKTIEVIS SGMLGSQSGS LQLMYKELQV LSPLAQTREF YFLRYCQQIE  360
QGQWAIVDVS YDFPRDNQFT NQCRSHRLPS GCLIQDMPNG YSKVSWVEHV EIEDKAPTHR  420
LYRDLIHSGL AFGAERWLAA LQRMCERFAC LMVSGTSTRD LEGVIPSPEG KRSMMKLAQR  480
MVNNFCASIS TSNGHRWTTL SGMNEVGVRV TIHKSTDPGQ PNGVVLSAAT TIWLPVSPQN  540
VFNFFKDERT RPQWDVLSNN NAVQEVAHIA NGSHPGNCIS VLRAFNTSQN NMLMLQESCI  600
DSSGSLVVYS PVDLPSINIA MSGEDPSYIP LLPSGFTISP DGRPEQGDGA STSSCNVHGS  660
GGSLVTVAFQ ILVSSLPSAK LNLESVNTVN TLIGTTVQQI KAALNCNSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein