PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g302210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 86aa    MW: 9564.79 Da    PI: 4.1946
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g302210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind23.81.1e-073381160
                      HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
      HSF_DNA-bind  1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                      +Fl+k+y+i +d++++ ++s s+ +nsfvvld+++fa            +  F RQLn+Y
  Pd.00g302210.m01 33 SFLTKTYDIADDPATNLIVSCSRYNNSFVVLDPQNFAI-----------VMCFFRQLNTY 81
                      59**********************************98...........45566666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MNPDQDPVSL SSSGAAPAHP PPMERLYDQG PPSFLTKTYD IADDPATNLI VSCSRYNNSF  60
VVLDPQNFAI VMCFFRQLNT YVSMTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.13e-17HSF family protein