PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g303230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 202aa    MW: 23611.2 Da    PI: 9.8395
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g303230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.52.1e-0783128555
                       HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       h  +Er RR++ ++++  L ++lP+ a      K +K  i++++   I++Lq
  Pd.00g303230.m01  83 HMLNERMRREKQKQSYMALHSMLPTgA------KSDKNWIVQMTAMNIQQLQ 128
                       6789*********************66......899999*****99999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MNMDQYILEA LEGEFLLNES IPVLNQRAFV PYTSRPITEK GLDKPPNSMN MNKRMVEFLR  60
KSWAPATARI VTGDDCRERG FRHMLNERMR REKQKQSYMA LHSMLPTGAK SDKNWIVQMT  120
AMNIQQLQRY KEELRKRNME VEAILAANEK ERVNWSKIRL RVANPTSGVD SMLEIGAAEI  180
EEALQETLYE AERKLRFSFP GR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.19e-28bHLH family protein