PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g304010.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 151aa    MW: 16441.4 Da    PI: 5.1316
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g304010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.3e-053353323
                      ETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                      C +C+++F +   L +Hi +H
  Pd.00g304010.m01 33 CRICDRVFMSTQALINHIESH 53
                      ******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MSGCNWNMRH GGNVHGSNCA PASMPSGSTE IACRICDRVF MSTQALINHI ESHIVDDGLT  60
ASRLRQLTQQ TNTNPPIRSN PGVVGSHYMV MQSANETAAR MASEEDDLSS DCTMPLLSQL  120
ERPLPPVNYE LDRRGNIGEA SSDNLDLTLK L