PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g307360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 246aa    MW: 27378.6 Da    PI: 7.3068
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g307360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.52.6e-076282246
                      T-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46
                      + W++I ++++ +Rt++++k++w++
  Pd.00g307360.m01  6 R-WSAITAHLP-KRTDNEVKNYWHS 28
                      4.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MRNLNRWSAI TAHLPKRTDN EVKNYWHSRL KKRLALKGYD PVTHKPKTTI FGSANGSTDD  60
RKTGSNLNHI AQWESARLQA EARFVRDSEL HKQAQNLYNN NDISTASSIL LGHNKDFGPT  120
NQLFGQNTPQ CLDILRAWES ILMSNYSKAT GGQDHVNSFG NGLAGDFEPP IISAISSSNG  180
SSLMDCFFHE PVGQCFDENY GTSITEPFAA VHHNMGFKNG ACLEDFGLWE IIMQGRKDCP  240
ISGISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.19e-31MYB family protein