PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g307400.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 257aa    MW: 28959.6 Da    PI: 6.7317
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g307400.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.92.1e-0717392346
                      -HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                      +W++I ++++ +Rt++++k++w++
  Pd.00g307400.m01 17 RWSAITAHLP-KRTDNEVKNYWHS 39
                      7*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MYRHEVEYGF LSLGLLRWSA ITAHLPKRTD NEVKNYWHSR LKKRLALKGY DPVTHKPKNT  60
IFGFANGSTD DPKTGSNLNH IVQWESVRLQ AEAIYLRDSE LHKQAYHPYN NNDIFATSSI  120
LSCYNKDFGP TDQLFGQNAP QCLDILRASE IILMSNYSKA TCSQDHVNSF GNRLAGDFEP  180
LIISAISKNG SSLMDCFVHE PVGQSFDENY GTSITEPFAT VHHNMGFKNN GACLEDFGLW  240
EIIMQGKKDC PISGISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.12e-27MYB family protein