PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g309840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 326aa    MW: 36549.4 Da    PI: 6.1294
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g309840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.46e-28130190259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg++WrKYGqK++ g+++prsYYrCt++   +C ++k+v+rs+edp+++eitY+g+H+++
  Pd.00g309840.m01 130 EDGHSWRKYGQKDILGTKHPRSYYRCTYRntqSCYATKQVQRSDEDPTIFEITYKGKHTCS 190
                       8***************************98889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDSSKSWEHK SLLTEIMEGM ELAKQLRLSL SAASSSDTRQ FLVQRILSSY EKALLILNFS  60
GPDQSTAGAI ASVPESLVSA NAGPCFDDYN KSPKDHHDLT DVSNKRKIMA KWTDHVMRVS  120
SENGIEGPHE DGHSWRKYGQ KDILGTKHPR SYYRCTYRNT QSCYATKQVQ RSDEDPTIFE  180
ITYKGKHTCS HGSNSVLPPP SPEQQEQKRN KQNNTSHQQQ SQGNQMSFPT TLRVDTKFLE  240
DRENMASPFS FTSTSFGSAG ESNYYLMPPS QMRNIAGNEQ LSECGHTEII SANNSSTNSP  300
IPDMDFPLEP VEIEPNFPFD TTGIFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-55WRKY family protein