PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g310790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 285aa MW: 32202.1 Da PI: 6.8341

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g310790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.1	2.2e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll+++++ +G g+ ++ +++ g+ R++k+c++rw++yl Pd.00g310790.m01 14 RGSWTAREDALLIQYIQSHGEGHRSSLPKKAGLLRCGKSCRLRWRNYL 61 89****************************99***********7 PP
2	Myb_DNA-binding	55.8	1.1e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eEd+l+v+++++lG++ W++Ia +++ gRt++++k++w+++ Pd.00g310790.m01 67 RGNITPEEDDLIVRLHALLGNR-WSLIAGRLP-GRTDNEIKNYWNTH 111 7999****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRAPCCSKV GLHRGSWTAR EDALLIQYIQ SHGEGHRSSL PKKAGLLRCG KSCRLRWRNY 60 LRPDIKRGNI TPEEDDLIVR LHALLGNRWS LIAGRLPGRT DNEIKNYWNT HIAKRLRTQK 120 TSTQEVAPKP KSKCVQAEEA KKSDDDQENI GATTKRTKLH LPKPTRVSLV KTPVGSFCDG 180 EGDHEQEVGF HDAEVPNYFH VSWPDDMKKK DDDCFGEGLV CGENVEDCYD FVQVFDPARS 240 QNSEQAAAAA ERVATTWKIC EEYEQDLKAD QDHGQLESFV DSLLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	2e-60	MYB family protein