PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g312560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 244aa    MW: 28369.1 Da    PI: 5.4479
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g312560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.71.4e-104712699
                      T---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 26 hggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      hg  ++ s ++ l+ +sg + e+kl  r++ g+++++kGW eF k   L+ g  +vF+++g+s+f  +v +f++
  Pd.00g312560.m01  4 HG--EHLSDQIHLKLPSGSESEIKL--RRCAGEFWFEKGWPEFSKFCSLDFGSCLVFRYEGKSKF--HVLIFDE 71
                      54..34677899*************..*********************************99999..***9986 PP
2B339.59.7e-131672431798
                       E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +p +f +++  +  +++t++l     r W v+l    +++ y +++GW  F kan LkegD+++F+l+++++  l v +fr
  Pd.00g312560.m01 167 HVPASFRKHFTPV--KNQTVRLLV-GDRLWPVTL--IFHPQNYRFSAGWGAFEKANWLKEGDICIFELMDKKNLVLEVNIFR 243
                       5788886555544..455788776.679******..66777799************************99999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDKHGEHLSD QIHLKLPSGS ESEIKLRRCA GEFWFEKGWP EFSKFCSLDF GSCLVFRYEG  60
KSKFHVLIFD ESGTEIEYPI MPQIEGTDEE EDDDMSVEEI WEIEDDEEDN DKFVESLEIE  120
TDEKKNRRKP RSSSKPSSLR ATVKAANKFV ASHPFFKITL GPSRKAHVPA SFRKHFTPVK  180
NQTVRLLVGD RLWPVTLIFH PQNYRFSAGW GAFEKANWLK EGDICIFELM DKKNLVLEVN  240
IFRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.14e-19B3 family protein