PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g315430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 468aa    MW: 52221 Da    PI: 4.2977
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g315430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.71.7e-171464150
               NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..k 50
                      lp GfrF+Ptdeel+++yL+ k++g++ ++ +vi+e+d++k+ePwdLp   +
  Pd.00g315430.m01 14 LPLGFRFRPTDEELIDYYLRSKINGNHKQV-TVIREIDVCKWEPWDLPDlsE 64
                      699************************999.99**************94232 PP
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    
MLVVDMAVLS TNTLPLGFRF RPTDEELIDY YLRSKINGNH KQVTVIREID VCKWEPWDLP  60
DLSELDGTNP GQNPFVLCRL FKKQDETIED SNFAEVEPTV SSSTAAISSP QDAQSDHALG  120
PASPSFERLD EKPTKVECTI ADCSNGMEPD TLQPFECPCN SYNGYDAEDQ LNVPLEELDI  180
FYDPPQRPLF SPLHSQMQTE LYYCGSNNFN NGHQGVKFQH GTNDQDADIS EFLSSIFNSS  240
GEYSDVDAKV AVPCETEFQN SVQSEGNIDR KGPVQNESTR IDCDQSSMFR VTSNHSNVFL  300
TGDAGTGIRL RTRETQNPTS TENFARQGDA PRRLRLQRKV LYCSNLSKDW NCRPEDQETK  360
PMAVEEIRDT EEKAVDAAVS NAVDAATDPP RKETMSTRPN FTPEGSILTG ERVPNVILQA  420
SPAGRSMWSF AFLFRVVVVV AFLFIMLLAY GDFISFDAAG SPFTARMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.25e-24NAC family protein