PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g315790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 219aa MW: 25439.5 Da PI: 8.2696

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g315790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.7	2.3e-19	33	87	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ ++f++eq++ Le+ Fe ++++ +++ + A++lgL+ rqV +WFqNrRa++k Pd.00g315790.m01 33 KNQRRFSDEQIRLLESIFEADSKLEPRRKVQVARELGLQPRQVAIWFQNRRARWK 87 56789*************************************************9 PP
2	HD-ZIP_I/II	121.6	4e-39	34	125	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ++rr+s+eq++lLE+ Fe+++kLep+rKv++areLglqprqva+WFqnrRAR+k+kq+E+d+++L++ y++l+++ e+L++e+++L ++++ Pd.00g315790.m01 34 NQRRFSDEQIRLLESIFEADSKLEPRRKVQVARELGLQPRQVAIWFQNRRARWKSKQIEQDFRTLRADYENLASRFESLKEEKQSLLMQMQK 125 68************************************************************************************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MEKTECSEAE NFGSVTTSLE PHATAKRKKA KSKNQRRFSD EQIRLLESIF EADSKLEPRR 60 KVQVARELGL QPRQVAIWFQ NRRARWKSKQ IEQDFRTLRA DYENLASRFE SLKEEKQSLL 120 MQMQKLNEVV GKPSQGLEGN IMADGSRLQE ELEPRGVIQS HKNNTSNDVG CHGDERHELL 180 SMAHVDASSL SPQDWHRFDP SILFDPSRFT SSHWLNFWT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	90	RRARWKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	4e-49	HD-ZIP family protein