PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g315920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 236aa    MW: 26172.5 Da    PI: 8.1563
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g315920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.71.2e-383494262
            zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                      k++al+cprC+st tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn+k+s
  Pd.00g315920.m01 34 KDQALNCPRCNSTTTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNNKRS 94
                      7899*****************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDTAHWPQGV GVVKSMEDSS PSRPILERRA RPQKDQALNC PRCNSTTTKF CYYNNYSLSQ  60
PRYFCKTCRR YWTEGGSLRN VPVGGGSRKN NKRSNSSSPS TSSAKKVAHD HHNHVTTNTP  120
HGNFPQHHDS ASPNPKIHFQ GQDLNLAYPP TDQEYDQPSH GLSFSLDGFE SSGYGCLQGV  180
PEANNNSHAR LLFPTDEDLK QQIPSTTTLT TEFNQHTRGE GDSGGYWNGM LGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64620.11e-39Dof family protein