PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g318270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 332aa    MW: 36548.9 Da    PI: 7.6726
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g318270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.43.7e-26179263388
              FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                       Yn+YA+ vGF+vrk+  ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e++HnH 
  Pd.00g318270.m01 179 YNKYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYQVTQFEEQHNHG 263
                       ******************************************999.999************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGAFKSAVNS LSCFQAALVL VLLIATAETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN  60
TNPSSDCCGA LQAVHPDCLC NTLRAIGCGQ LKFTRKHYCT RSMEREDDDF GSLHEDSMDV  120
GLQATNRLDL NVEQDSRSPK VVYVNGTQSN PPSIGADSKD SVLEVGTEFE SDEHAYKSYN  180
KYARLVGFNV RKDWVNRSKV HGQVVSRKFT CSKEGYRRKD KRDVNVKKHR KETRTGCLAH  240
MIITRQPDGK YQVTQFEEQH NHGNVNSSIA QALPEQHNHD NVNLSIAQAL PLQRECTVPE  300
AADADSVKEL GSLSKSALDS MNRGFRKRLT SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-18FAR1 family protein