PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g318360.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 754aa    MW: 82294.7 Da    PI: 4.9219
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g318360.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like77.91.3e-24210263155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kp+++Wt+ LH++F+ a++++ G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  Pd.00g318360.m02 210 KPKVVWTNSLHNQFLLAIKHI-GLDKAVPKRILEFMNVPGLTRENVASHLQKYRI 263
                       79*******************.********************************6 PP
2Myb_DNA-binding27.29.2e-09213262248
                       SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                         WT  ++ +++ a+k  G +   +k+I + m+  g+t++++ s++qky+
  Pd.00g318360.m02 213 VVWTNSLHNQFLLAIKHIGLDkaVPKRILEFMNvPGLTRENVASHLQKYR 262
                       68***********************************************7 PP
3Response_reg76.31.1e-25271351109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       +l+vdD+ + + ++  +l+   y +v +++++ +al++l++++  +Dl+++D+ mp+m+G+el k+ +ee  klp+i+++a ++e+ +l+ l+
  Pd.00g318360.m02  27 ILVVDDDATTLAIVSAMLKTWSY-QVVSVRNPIDALATLRARKgiFDLVVTDLHMPQMNGFELQKHVHEEF-KLPVIMMSADDKESVILKSLE 117
                       89*********************.9999***********99999*************************99.********************* PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        G+  +++Kp++++++ +
  Pd.00g318360.m02 118 GGVVYYIVKPVSKDDIKN 135
                       **************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    
MDAATERSEF RQSSANTKPS FVDMINILVV DDDATTLAIV SAMLKTWSYQ VVSVRNPIDA  60
LATLRARKGI FDLVVTDLHM PQMNGFELQK HVHEEFKLPV IMMSADDKES VILKSLEGGV  120
VYYIVKPVSK DDIKNVWQYA VAAKKGKSVT IEEIESAPGE APGEVEDGSS ETSSDTDEEK  180
QKKKAEAKVK KERKRHREDD NEERMVAPKK PKVVWTNSLH NQFLLAIKHI GLDKAVPKRI  240
LEFMNVPGLT RENVASHLQK YRIFLKRVAE KARLSKCLSE RVFRSSFALG HPALVFNNVQ  300
RDQYYSQLLN PQQMGTSIAS TFQPSAGNGN TLALTAAASN NLGSIQFPNY HQSSSSNSSR  360
SFPQLIGSGQ LRLLSNNQAN ILCQQPMLGG NEDQLLCQAN SRTAAFGVQQ LMNTFGNGGM  420
SFGLTNNNFG LTNNNIGTNS LMQVHPQQNQ PRQNRVFTFT NNPFSYNFAT SGNQISSSYT  480
PLSSSFENMG STVNNVNQRV PNSSHQLVSN FAGSQIMSSS GRELVGLMGS QAAGMLNNIT  540
NINIGGGYPN VSLTGAPIGN NNGIFNSGYM AQLGASSSSM SSSAGFEISA SSAYQFPPSL  600
LKNNGDDQQQ NVPVLPPSAG NINDQCGLAN MNVGGGNVEN SHSGVMDNTI TTDAPPTLIN  660
NNNISHEQEL IGDIDDLMLS NLFMDQQNYE PSPPPFQQQD GDQDQLPPDF ASFLYQVEVP  720
DPSADQVPNL DSYHVEDNAD CDDDFLNAIL DSDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-56ARR-B family protein