PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g319630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 144aa    MW: 15977.1 Da    PI: 8.2822
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g319630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.31.4e-1324903399
                      -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      +  ++l+d++gr W++kl+ + ++gr ++t+G     +an++  gD++vF+l++rse  + +++fr+
  Pd.00g319630.m01 24 KERVMLKDPNGRPWNIKLRLSENGGRLLMTQGLVACWQANNISLGDTIVFELVKRSEMDMEIHIFRT 90
                      3469***************************************************9999******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MILPCVLTCL PCERRAVAEG LIGKERVMLK DPNGRPWNIK LRLSENGGRL LMTQGLVACW  60
QANNISLGDT IVFELVKRSE MDMEIHIFRT GAGGNMCSVV LDASSSVKYI KPVVQFTSLS  120
NVLLCLDSMY LAPMIKVVCA FLWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.14e-07B3 family protein