PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g320140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 184aa    MW: 20421.9 Da    PI: 8.7261
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g320140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB161.89.6e-5163158196
             NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       vreqd+++Pianv+rim+++lP +akis+daket+qecvse+i+f+t+ea+++cqre+rkt++++d+lwa+++lGf++yvepl+++l+k+re 
  Pd.00g320140.m01  63 VREQDQYMPIANVIRIMRRILPPHAKISDDAKETIQECVSEYIAFITGEANERCQREQRKTVTAEDILWAMGKLGFDNYVEPLTLFLQKHRES 155
                       69******************************************************************************************9 PP

             NF-YB  94 ege 96 
                       e+ 
  Pd.00g320140.m01 156 ENS 158
                       875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MERMRGPPSS RHAKSSSAQV NNSERSNSKA PINTTPAATN SNAAAAAANA GDPAQLAPQQ  60
SVVREQDQYM PIANVIRIMR RILPPHAKIS DDAKETIQEC VSEYIAFITG EANERCQREQ  120
RKTVTAEDIL WAMGKLGFDN YVEPLTLFLQ KHRESENSDR STLRAEFMKR DRAVDFGPAG  180
PRLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21970.12e-60NF-YB family protein