PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g325430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 256aa    MW: 27980.3 Da    PI: 4.777
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g325430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.21.1e-18175208134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       Cs+C++ kTp+WR gp g ktLCnaCG+++++ +
  Pd.00g325430.m01 175 CSHCHVQKTPQWRTGPLGAKTLCNACGVRFKSGR 208
                       *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MELCMEAKAL KSSLRRELAL KSNQQALIDE FWCATGISGV PSEDFSVDDL LDLSNGEFED  60
GSVEEEEEEK DSVSVDDESS NSSNFVSADS ESALASQLLV PDDDLAGLEW VSHFVDDSLL  120
DLSLLHPVGT QKPEALALTR TDVFVGEPAT KKQKKKPAVQ TGVDGSVGVQ FQRRCSHCHV  180
QKTPQWRTGP LGAKTLCNAC GVRFKSGRLF PEYRPACSPT FSGDVHSNSH RKVLEMRKRK  240
EAGGPEPGLN RVIPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.14e-44GATA family protein