PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g328380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 91aa    MW: 10364.7 Da    PI: 8.5173
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g328380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-0721571854
                      HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      +  ++Lr+l+P+ +   +s K+s + +L++++ YI++L
  Pd.00g328380.m01 21 ELVSKLRQLVPEiR-DRRSDKVSASKVLQETCSYIRNL 57
                      56689*******76.99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MSSRRSRQSG TPTIKDDQII ELVSKLRQLV PEIRDRRSDK VSASKVLQET CSYIRNLHRE  60
VDDLSERLSQ LLSTIDADSP EAAIIRSLIT Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-41bHLH family protein