PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g328560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 218aa    MW: 23678.3 Da    PI: 9.2537
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g328560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer44.73.1e-141322959
       ZF-HD_dimer 29 mpsegee.gtaaalkCaACgCHRnFHRrevee 59
                      mps+++  +++++lkCaACgCHRnFHRr++e+
  Pd.00g328560.m01  1 MPSPTAIpTDPTSLKCAACGCHRNFHRRDPED 32
                      6777777799******************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MPSPTAIPTD PTSLKCAACG CHRNFHRRDP EDPMPPSTAA TTHVIEYQPH HRHHPPPPTH  60
GGNRSPNSAS PPPISSSYYP SAPHMLLALS TAHENALGGP NNHHSPQPPI VSPSPNARKR  120
FRTKFSQEQK DKMHQFAERV GWKMQKRDEE IVQEFCNEIN VDKGVLKVWM HNNKNTFAKR  180
DVINGSGGGL SGGNLNHYQG TDGGAAGHVG TNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.16e-45ZF-HD family protein