PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g329840.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 360aa MW: 40447.5 Da PI: 7.0658

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g329840.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	96.9	2.4e-30	76	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r+e++ k + k+rr ra tr gCka ++v++++ g+w+v+kle++HnHe Pd.00g329840.m01 76 NFYNAYAKQTGFSIRVNSYYRSKKDNSIISREFCCSKEGFRRERHAKkdsgeDAKRRRARALTREGCKALMTVRRRDCGRWYVAKLEKNHNHE 168 6****************************************999989999899999********************************* PP FAR1 89 la 90 l+ Pd.00g329840.m01 169 LV 170 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MEVVPSSECE AKGVDSFVAL GDEGYEHSVA EEVEAPVVLD DGKEGYVDFD LSQYIGGGVV 60 EPTLGMEFTS EDDARNFYNA YAKQTGFSIR VNSYYRSKKD NSIISREFCC SKEGFRRERH 120 AKKDSGEDAK RRRARALTRE GCKALMTVRR RDCGRWYVAK LEKNHNHELV TPAMRHFLRS 180 HKQDFAPEKS CSNSFSSPGL SLDAPVDVLT DCSSFGKMEF AVQSNVNYIG RGRLSTFGID 240 AQKFETFYTK PVLKTPLPVE KQGADIYTRN MFTIFQDEVF ESLLFAVKLS AEDGGTSSYE 300 ANSQKGRNLQ YNILYQEAIK CAEEGMASDQ IFKVALNALR EARVKIVGAK RNAMKSMPQN

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MEVVPSSECE AKGVDSFVAL GDEGYEHSVA EEVEAPVVLD DGKEGYVDFD LSQYIGGGVV  60
EPTLGMEFTS EDDARNFYNA YAKQTGFSIR VNSYYRSKKD NSIISREFCC SKEGFRRERH  120
AKKDSGEDAK RRRARALTRE GCKALMTVRR RDCGRWYVAK LEKNHNHELV TPAMRHFLRS  180
HKQDFAPEKS CSNSFSSPGL SLDAPVDVLT DCSSFGKMEF AVQSNVNYIG RGRLSTFGID  240
AQKFETFYTK PVLKTPLPVE KQGADIYTRN MFTIFQDEVF ESLLFAVKLS AEDGGTSSYE  300
ANSQKGRNLQ YNILYQEAIK CAEEGMASDQ IFKVALNALR EARVKIVGAK RNAMKSMPQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-30	FAR1 family protein