PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g333140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 140aa    MW: 16345.2 Da    PI: 9.2861
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g333140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.55.8e-3366124159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  Pd.00g333140.m01  66 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHT 124
                       59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MSVQYTTKVG TLDPKAISDE NGTGNASDCS NSWWRSSSSE KSKMKVRRKL REPRFCFQTR  60
SDVDVLDDGY KWRKYGQKVV KNSLHPRSYY RCTHSNCRVK KRVERLSEDC RMVITTYEGR  120
HNHTPCDDSN SSEHECFSSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14551KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.13e-60WRKY family protein