PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g338140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 420aa MW: 47026.7 Da PI: 4.4191

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g338140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90	4.2e-28	52	126	54	129
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ +wyfF++r+kky++g+r +rat+ gyWk+tgkd++vl +g+ vg ktL+f++grap+g +t+Wvmheyrle Pd.00g338140.m01 52 GDLKWYFFCPREKKYRSGNRIQRATEGGYWKTTGKDRSVLY-SGAIVGWIKTLIFHTGRAPSGDRTNWVMHEYRLE 126 6679***********************************.999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MWLCSQFARR LFLLFNLVLH FRAFILHPMS FDHNKEHSSI IRAFYKSCWD CGDLKWYFFC 60 PREKKYRSGN RIQRATEGGY WKTTGKDRSV LYSGAIVGWI KTLIFHTGRA PSGDRTNWVM 120 HEYRLEDQGL ADRGVPLDSY VLCMIFQKEA LGPRIGAQYG APFKEEDWSD DEVEITSEAV 180 QVAITPEPDL GLPCNYVSPT ATNAHSVGDI GVGPSGSGIY DILPPFCEVS QPVSSNYVTL 240 EMPLASVGDD IISMFDCFTE ESALYTDGPK KVEAEGRLET VQNANMPSTH SPEVIGVGPS 300 FESCGFDVLP PCNVNKSFVT MENPPASNGD ETLPIMDCFA EESVFLVNDN GKNEELNNLE 360 HLGNATPHFN TSNIYEDLGD LENLGRVGEV GYNFCSEPDS RSHFLELYDL DQPQHPNLFF

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MWLCSQFARR LFLLFNLVLH FRAFILHPMS FDHNKEHSSI IRAFYKSCWD CGDLKWYFFC  60
PREKKYRSGN RIQRATEGGY WKTTGKDRSV LYSGAIVGWI KTLIFHTGRA PSGDRTNWVM  120
HEYRLEDQGL ADRGVPLDSY VLCMIFQKEA LGPRIGAQYG APFKEEDWSD DEVEITSEAV  180
QVAITPEPDL GLPCNYVSPT ATNAHSVGDI GVGPSGSGIY DILPPFCEVS QPVSSNYVTL  240
EMPLASVGDD IISMFDCFTE ESALYTDGPK KVEAEGRLET VQNANMPSTH SPEVIGVGPS  300
FESCGFDVLP PCNVNKSFVT MENPPASNGD ETLPIMDCFA EESVFLVNDN GKNEELNNLE  360
HLGNATPHFN TSNIYEDLGD LENLGRVGEV GYNFCSEPDS RSHFLELYDL DQPQHPNLFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	2e-63	NAC family protein