PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g338300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 251aa    MW: 27766.7 Da    PI: 4.8493
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g338300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-184291255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Pd.00g338300.m01 42 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 91
                      799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEFQFQQQNQ ICFPAAANKA VGIPMSKVGT SKGRTRSNNT NKFVGVRQRP SGRWVAEIKD  60
TTQKIRMWLG TFETAEEAAR AYDEAACLLR GSNTRTNFIT HVSLDSPLAS RIRNLLSTKK  120
GGSSKQVTEQ TSPSIADHDD MNASHPPTSS TTSSDNGSDT LSSEVFEDSQ LFDDVYRPDL  180
RHCNEEFELS SSASQSNLSW GGFEPGVDGM KVERQISASL YAMNGVQEYM DTVYDPNEPS  240
WDLPPLCPLF C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-29ERF family protein