PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g338700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 88aa    MW: 10261.9 Da    PI: 10.0857
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g338700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57344.83.5e-143573693
            DUF573 36 afyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93
                      +fy+f+k+ ++++v+k+ql +Ki +LKkK++++++k   gk+ +  k+h+  +f+ls+
  Pd.00g338700.m01  3 DFYDFIKNLLKADVNKTQLQDKICKLKKKYETNMAK---GKKYNTVKPHELTVFDLSR 57
                      7***********************************...9999*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MVDFYDFIKN LLKADVNKTQ LQDKICKLKK KYETNMAKGK KYNTVKPHEL TVFDLSRYGA  60
AAKGLRSVWV GESWGCWRVT WSLLENQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-09GeBP family protein