PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g340060.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 326aa    MW: 37009 Da    PI: 4.2529
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g340060.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.78.3e-1871432128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkat 86 
                       p GfrF+P+dee+v  +L + + ++k  ++l +  ++ +++  +++eP+++ kk+ +    ++++yf sk +k ++ ++  +r+ + g+W++t
  Pd.00g340060.m01   7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfFHACNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSET 98 
                       89******************97776658555444489999733589*****8544433224557777777766554.5566668999****** PP

               NAM  87 gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++k v++k     + + +g k+ + + ++  ++  +t W+++ey+l
  Pd.00g340060.m01  99 ESSKLVHEKvsgnpNPNPIGRKRKFRYENK--SSEDHTGWLLDEYSL 143
                       ******999877666667********9844..44469********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEVSLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFHACNLFGN NTEPSEIWKK  60
YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK  120
RKFRYENKSS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKQ  180
SSSQQGCSSS PIGGDLVGFD PIDLTIFEEN TMADMEQLLG EAWSPSNFEN EENTMASMEQ  240
LLGEAWSPSN FQDAVSYDVD PIGETQINFE NEENTMANME QLLGEAWSPS EFENVVSHDV  300
DPIGETQSSQ LSNWSQAVLD QLLVGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.19e-10NAC family protein