PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g340440.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 151aa MW: 17746.5 Da PI: 10.7643

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g340440.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.5e-19	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ l ++++ +G g+W++ ar+ g++Rt+k+c++rw++yl Pd.00g340440.m01 5 RGPWTVEEDLALMNYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 52 89********************************************97 PP
2	Myb_DNA-binding	51.9	1.7e-16	58	101	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ Pd.00g340440.m01 58 RGDITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 101 67789***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MDLRRGPWTV EEDLALMNYI ANHGEGRWNS LARCAGLKRT GKSCRLRWLN YLRPDVRRGD 60 ITLEEQLLIL ELHSRWGNRW SKIAQHLPGR TDNEIKNYWR TRVQKHAKQL KCDVNSKQFK 120 DTMRTNVVAT KSPLWGIVTF TCHTKLHPGQ L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-75	MYB family protein