PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g343740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 249aa    MW: 28530.9 Da    PI: 4.6012
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g343740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.32.3e-13795282
               NAM  2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevd.iykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgy 82
                      p GfrF+Ptd+el++++L kk+ +k+       +++++e++ + ++ePw    ++ +    ++++yfFs+ ++ +++gkr +r++++g 
  Pd.00g343740.m01  7 PLGFRFRPTDQELLSYFLYKKAITKDplmaSYYSNIVHEFNfLGETEPWVVWDQFGGpglVDEDLYFFSELKTLSQKGKRIKRKIEAGE 95
                      78*******************8888867643334579999736799*****74443333367899******************988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MANNNRPLGF RFRPTDQELL SYFLYKKAIT KDPLMASYYS NIVHEFNFLG ETEPWVVWDQ  60
FGGPGLVDED LYFFSELKTL SQKGKRIKRK IEAGEAQKIV LCRLKKNSRV SNKRNNSTQE  120
FKEKPSNKKA RKELASATVK IDDEEPQRSS SLSSVVNNHD QELIFDINYN AISNYLCSDD  180
QDNSDDPFDY GCVTDEEYAI GMDALLGIPP LSQELPHMAE TLQVEALNSS GLENICNQQL  240
DDITYWFNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-07NAC family protein