PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g345020.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 223aa MW: 26128.4 Da PI: 7.977

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g345020.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.2	1.2e-17	10	140	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 f+FhPtd+e++ L k v +++ + + ++++ d++ + ePw++ + + + ++++++f ++ ++ + g+r++r + +g+W++ Pd.00g345020.m01 10 AFHFHPTDQEIIRSILYKMVIEREplnPSYHGIVHDEDLFGTkEPWKIWEdygRDQLHDQDLFFLCQLKRINDCGSRTHRrIGYEGTWSQRVA 102 69****************988887765556679999998779**74234334477899************995566***** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k +++ + + +g + L + + ++ + ++W+++ey+l Pd.00g345020.m01 103 PKLIYDGNPNPIGSVRKLRYKN--PKSKHDAEWFLDEYSL 140 **9999******84..444469******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MANSRNVSLA FHFHPTDQEI IRSILYKMVI EREPLNPSYH GIVHDEDLFG TKEPWKIWED 60 YGRDQLHDQD LFFLCQLKRI NDCGSRTHRR IGYEGTWSQR VAPKLIYDGN PNPIGSVRKL 120 RYKNPKSKHD AEWFLDEYSL FVGDDGHDQT TPGFDFVVCR LRRNHNKFDR IRASVHKKTN 180 KAPQQIHERK RKSMNVVINI DDDEEEEVVP HGCSSAKSHS CSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	9e-10	NAC family protein