PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g347790.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 176aa    MW: 20064.8 Da    PI: 10.4528
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g347790.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.87.2e-1590149155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV++++++gr++A+++d  ++  g  ++ ++ +lg ++ +e+Aa+a++  ++k++g
  Pd.00g347790.m01  90 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQAYLGGYDMEEKAARAYDLTALKYWG 149
                       78*******************988886678446*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MVDLVMVQAG VEIVAELVGV TLGPKGRNVV LQNKLSWRTL WRMLEDHVEN VGVKLVRQAG  60
AKTKKRGGGK LSQKQPVHRK SIHTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR  120
KGRQAYLGGY DMEEKAARAY DLTALKYWGQ SYVYENASSG DTTEDIMLDL QNPRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.14e-46AP2 family protein