PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g348860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 330aa    MW: 37537 Da    PI: 4.8214
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g348860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.81.5e-21101413128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatg 87 
                       +GfrFhPtd+el++++L kk+ +k+    + ++++++++ + ++ePw         +  ++++yfFs+ ++ +++g+r +r + + g+W++  
  Pd.00g348860.m01  10 VGFRFHPTDQELISYFLYKKAVAKEplmASYSNIVHDFNlLGETEPWVVWDifgGPDLIDEDLYFFSELKNLSPNGSRIKRkIEAGGTWSEAF 102
                       7*******************888886765556679999725689***9964233223356799******************5555899**888 PP

               NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++k   +++g+ +g kk L + +  +   ++ +W+++ey+l
  Pd.00g348860.m01 103 SKKVDDETTGNPIGRKKNLRYEN--EGCEHHGKWLLEEYSL 141
                       755555559999********983..4444589*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MTNYSGNRLV GFRFHPTDQE LISYFLYKKA VAKEPLMASY SNIVHDFNLL GETEPWVVWD  60
IFGGPDLIDE DLYFFSELKN LSPNGSRIKR KIEAGGTWSE AFSKKVDDET TGNPIGRKKN  120
LRYENEGCEH HGKWLLEEYS LVDQETQKIV LCRLKKNNRV WNKINNSTQE LKEKPSNKKA  180
RKGLGSPRIK MEDEEPHRTS GLSSVYNNLD QELIIDTNYN AISNNICGDN QHNMLMTSDF  240
ASDPVCFDYG GLTDEEYVFD VNELLASVEP QPLSLELPQM AETLEPLLSS GLGDDRAVEA  300
WNSSGLENIY ATNKKTSHIG STVKKYFENL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-15NAC family protein