PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g350200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 485aa MW: 54727.5 Da PI: 10.1768

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g350200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.7	3.4e-30	322	375	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl Pd.00g350200.m01 322 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 375 59*****************.******************************8 PP
2	Myb_DNA-binding	47.2	5.1e-15	324	374	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ Pd.00g350200.m01 324 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 374 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MRLWRPSPET IARPLYHCFQ HLGISSSRNL LADSSFESPL QSTVAPVSAS DGERNEEHNQ 60 KPLSKPSQVQ FVLKGIKMSS NKVNLVAKLV RGMRVEDALL QLQVTDKQAV KTVYQALHSA 120 RADATYNHGL DPERLLVAGA FVGKGFLGFH KNRLYYHGKS NNGTKVRPNN YQLMVTLREI 180 TPEEEGEIAR QRANNFLYLT KRLRLAKKEN KFVPRQLIRN HKGEVFIWKF TPYLLASIVL 240 PEKASVVEQF QSRAELWDDE CVRRKLGEQN SGNWVGGWEE ELPSPEELMP LSQTLITPDL 300 ALAFDIRNNN PNNPKPARTL KRPRLVWTPQ LHKRFVDAVA HLGIKNAVPK TIMQLMSVDG 360 LTRENVASHL QKYRLYLKPS ADPATDHLFA SSPVPAHFLH PHPGGRPNSE HFMPFVPYHR 420 QVGHFGSPPN GQFEHPFLAR QSSQPVHRMG APLHNPVPGS YVEDLESANA TGGRKVLTLF 480 PTGED

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MRLWRPSPET IARPLYHCFQ HLGISSSRNL LADSSFESPL QSTVAPVSAS DGERNEEHNQ  60
KPLSKPSQVQ FVLKGIKMSS NKVNLVAKLV RGMRVEDALL QLQVTDKQAV KTVYQALHSA  120
RADATYNHGL DPERLLVAGA FVGKGFLGFH KNRLYYHGKS NNGTKVRPNN YQLMVTLREI  180
TPEEEGEIAR QRANNFLYLT KRLRLAKKEN KFVPRQLIRN HKGEVFIWKF TPYLLASIVL  240
PEKASVVEQF QSRAELWDDE CVRRKLGEQN SGNWVGGWEE ELPSPEELMP LSQTLITPDL  300
ALAFDIRNNN PNNPKPARTL KRPRLVWTPQ LHKRFVDAVA HLGIKNAVPK TIMQLMSVDG  360
LTRENVASHL QKYRLYLKPS ADPATDHLFA SSPVPAHFLH PHPGGRPNSE HFMPFVPYHR  420
QVGHFGSPPN GQFEHPFLAR QSSQPVHRMG APLHNPVPGS YVEDLESANA TGGRKVLTLF  480
PTGED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10760.1	4e-70	G2-like family protein