PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g350920.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 1720aa MW: 187380 Da PI: 6.4539

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g350920.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.3e-10	804	847	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE el+++ + G++ +++Ia+ + ++t +c+++++k+ Pd.00g350920.m02 804 NPWTPEEKELFIEKLTTCGKD-FRKIASFLD-HKTTADCVEFYYKH 847 69***************99.*****.**********97 PP
2	Myb_DNA-binding	26	2.2e-08	1023	1063	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+r++ +R+ qck ++ Pd.00g350920.m02 1023 DWTDAEKSSFIQAVSSYGKD-FAMISRCVR-TRSQHQCKVFFS 1063 6***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1720 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG 60 GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW 120 ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG 180 AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA 240 TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS 300 VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR 360 NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK 420 LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPCP ATSSSLPVED NDKSFKEQVT 480 VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV 540 KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV 600 PGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGIS ISSSGKNDSL 660 IKEKFAMRKR RLRFMERVLT LKYRAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG 720 YQKHRSSIRS RFSTPGNLSL VPTTEIINFT NKLLSDSQVK CYRNSLKMPA LILDKKEKMV 780 TRFISSNGLV EDPCVVEKER ALMNPWTPEE KELFIEKLTT CGKDFRKIAS FLDHKTTADC 840 VEFYYKHHKS VCFEKTKKKA DMTKQGKSSA KTYLISNGKK WNREMNAASL DILGAASAIA 900 AHADGSTRSR QAYSGRLFLG GYRNTNPSRG DDTTVERSCS FDAIGNERET VAADVLAGIC 960 GSLSSEAVSS CITSSIDPGE GYREWKCQKV DSLARRPLTP DVMQNVDDET CSEESCGEMD 1020 PSDWTDAEKS SFIQAVSSYG KDFAMISRCV RTRSQHQCKV FFSKARKCLG LDLVHPVAGN 1080 GTSVGDDVNG GGSDTEDACV LETGSGISSD KSGCRMNEDM PLSVINMDDE SDPAETMNLQ 1140 TGPLRSEENN VMGQLDHEGV QTLKSLASDA LEAEDRPNLV LDDAQKSRVL SADALKDDVA 1200 EEGILIAESE PVGGGINFDP TNPGMDGEKL MGELSSDGNT DTSRCSLPGS VHDSNSSGNA 1260 SALAGGGSCS GFSLNPECLH QVSVGLNSMQ KPSVISMPHE NRHAPADSVS QDSAKIECEK 1320 AFNQDRLSST LDLQEGRDPK SVGIDECHQH LPGLPIYTNV ESSQVLKGYP LQMATKKDTN 1380 GDVMSGNLSE VQNFSKPDRK INGHYMTKDG FLQFGNCKPQ WSEVDFPLAP QKVEQPVGPP 1440 KAHSWSSSDS DKPSRNGDVK LFGKILSNPS SLSKSSSNIH ENEEKGAHNH KLSNTSSNLK 1500 FTGHHNADGN SSLLKFDCSS YLGIEKVPRR SYGLWEGNKV HSGYPSFSDS AILLAKYPAA 1560 FGNFPTTSSK MEQQPLQAVV KNNDRNINGV SVFPSREISG SNGVVDYPVF SRSRDGAKVP 1620 PFTVDVKQQQ QRQDVFDMPR RNGFDTISSL QQQGRGIVGM NVVGRGGRGG ILVGGPCTGV 1680 SDPVAAIRMH YAKTEQYGGQ PGSMIREEES WRGGKGDVGR

Sequence ? help Back to Top

Protein Sequence Length: 1720 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSPHHAPR DFNRWPSADF RRPPGHGKQG  60
GWHLFSEDSG HGYASSRSGD KMLEDESCRP SFSRGDGRYG RNSRDNRGSY SQRECKGHSW  120
ETSSGSPNTP GRPNDVINEQ RTQDDMLTYS SHPHSDFGST WDQIQLKDQL DRMGGSTGLG  180
AGQKCERENS LGSIDWKPLK WTRSGSMSSR GSGFSHSSSS KSIGAIDFNE AKVESQPKNA  240
TPMQSPSGEA TTCVTSAAPS EETTSRKKPR LGWGEGLAKY EKKKVEVPDG SMNKDGAVCS  300
VGNMEPVHSL SSNLADKSPR VTVFSDCASP ATPSSVACSS SPGVEEKSFG KTANVDNNNR  360
NFCGSPGPMF QSHHEGFTFN LEKLDCNSIA NLGSSLRELL QSDDPSSVDS GIVRPTAMNK  420
LLIWKGEISK VLEVTESEID SLENELKVLN SDSGGSCPCP ATSSSLPVED NDKSFKEQVT  480
VTNLITRPAP LQIHSSGDTD AEKMCLGNGD QVEFCGIVKD EDIDSPGTAT SKFVEPLPLV  540
KVVSSSDVMS HNDCSGDLDP IETTKGEAKC LVPGKYEEKT DLSACGNSSM LLGSEIVAPV  600
PGGSGLCFSV VDTICDSICS SNKESANRSF DVFNKLLPRE HYKVDISGIS ISSSGKNDSL  660
IKEKFAMRKR RLRFMERVLT LKYRAFQHLW KEDLRLLSIR KYRPKSHKKF ELSLRATNNG  720
YQKHRSSIRS RFSTPGNLSL VPTTEIINFT NKLLSDSQVK CYRNSLKMPA LILDKKEKMV  780
TRFISSNGLV EDPCVVEKER ALMNPWTPEE KELFIEKLTT CGKDFRKIAS FLDHKTTADC  840
VEFYYKHHKS VCFEKTKKKA DMTKQGKSSA KTYLISNGKK WNREMNAASL DILGAASAIA  900
AHADGSTRSR QAYSGRLFLG GYRNTNPSRG DDTTVERSCS FDAIGNERET VAADVLAGIC  960
GSLSSEAVSS CITSSIDPGE GYREWKCQKV DSLARRPLTP DVMQNVDDET CSEESCGEMD  1020
PSDWTDAEKS SFIQAVSSYG KDFAMISRCV RTRSQHQCKV FFSKARKCLG LDLVHPVAGN  1080
GTSVGDDVNG GGSDTEDACV LETGSGISSD KSGCRMNEDM PLSVINMDDE SDPAETMNLQ  1140
TGPLRSEENN VMGQLDHEGV QTLKSLASDA LEAEDRPNLV LDDAQKSRVL SADALKDDVA  1200
EEGILIAESE PVGGGINFDP TNPGMDGEKL MGELSSDGNT DTSRCSLPGS VHDSNSSGNA  1260
SALAGGGSCS GFSLNPECLH QVSVGLNSMQ KPSVISMPHE NRHAPADSVS QDSAKIECEK  1320
AFNQDRLSST LDLQEGRDPK SVGIDECHQH LPGLPIYTNV ESSQVLKGYP LQMATKKDTN  1380
GDVMSGNLSE VQNFSKPDRK INGHYMTKDG FLQFGNCKPQ WSEVDFPLAP QKVEQPVGPP  1440
KAHSWSSSDS DKPSRNGDVK LFGKILSNPS SLSKSSSNIH ENEEKGAHNH KLSNTSSNLK  1500
FTGHHNADGN SSLLKFDCSS YLGIEKVPRR SYGLWEGNKV HSGYPSFSDS AILLAKYPAA  1560
FGNFPTTSSK MEQQPLQAVV KNNDRNINGV SVFPSREISG SNGVVDYPVF SRSRDGAKVP  1620
PFTVDVKQQQ QRQDVFDMPR RNGFDTISSL QQQGRGIVGM NVVGRGGRGG ILVGGPCTGV  1680
SDPVAAIRMH YAKTEQYGGQ PGSMIREEES WRGGKGDVGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein