PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g352350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 193aa    MW: 22166.6 Da    PI: 4.9849
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g352350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind102.44e-322869102
                       HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS
      HSF_DNA-bind   9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101
                       ++ed++++++isw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++         weF +++F+kg+k++l++i+r+k
  Pd.00g352350.m01   2 LVEDPATDDVISWNDDGSAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVSTSR---------WEFCNDKFRKGEKDQLCDIRRRK 85 
                       799*******************************************************999.........*********************98 PP

                       X CS
      HSF_DNA-bind 102 s 102
                        
  Pd.00g352350.m01  86 A 86 
                       5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MLVEDPATDD VISWNDDGSA FVVWQPAEFA RDLLPTLFKH SNFSSFVRQL NTYGFRKVST  60
SRWEFCNDKF RKGEKDQLCD IRRRKAWASK QQPINNIALN QAAQAMPNQD EFDEDQRSNS  120
STSSSSDYSS LVDENKRLKQ ENGVLSSELT SMKRKCKELL DLVVKYGDSA EKEEEENNSP  180
LVAIPKKDTH LNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.11e-56HSF family protein