PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g353240.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 244aa MW: 27730.8 Da PI: 9.0231

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g353240.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	36.6	1.3e-11	9	110	1	94
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........leleevikevdiykveP.w.dLpkkvkaeekewyfFskrdkkyatgkrknratksgy. 82 lp+G+rF+P+ l+ +yL ++v++ l+ +++ e+d+y e w +L +++e+++yfF++ +kk+ +g+r +r+ g Pd.00g353240.m01 9 LPVGCRFEPSKTKLLAHYLYNRVAHYLynkvnglpLSS-NTVIECDLYGKEEtWrKLF--DETGETSLYFFTELKKKTMRGSRVERTSLGGCv 98 799***********9999998887754555532333.3588999997754141443..34578899***************8776655 PP NAM 83 .Wkatgkdkevls 94 Wk++ dk+++ Pd.00g353240.m01 99 tWKNQS-DKAIYG 110 59874.577765 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
METTRGLGLP VGCRFEPSKT KLLAHYLYNR VAHYLYNKVN GLPLSSNTVI ECDLYGKEET 60 WRKLFDETGE TSLYFFTELK KKTMRGSRVE RTSLGGCVTW KNQSDKAIYG NDGPPNKTLI 120 GSGVLVDINV SYLNSAYSSE EVEVKAKALR VGKAVGVASV ELRKKKTCKI IAQGYHTKLD 180 YVLCRIINKQ KLQLTRLRDK QKMYIVNEKN DPNDQEVNIA NDQKDQEMDI ASEVLKLLDA 240 EEMY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	191	RKKKTCKIIAQGYHTKLDYVLCRIINKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03200.1	8e-09	NAC family protein