PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g356080.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 228aa MW: 25803 Da PI: 6.3534

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g356080.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.5	7.2e-14	9	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 +g WT+eEd l+d+v+ +G+g+W++I++ g R +k+c++rw +yl Pd.00g356080.m01 9 KGLWTKEEDTVLLDYVTVHGSGRWNRIPKLTGktlstlctCLRNGKSCRLRWINYL 64 678*********************************9966**********97 PP
2	Myb_DNA-binding	55.7	1.1e-17	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++l+++++++lG++ W++Ia +++ gRt++q+k++w++ Pd.00g356080.m01 70 RGDFSEEEEDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNYWNT 113 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MEAENEYKKG LWTKEEDTVL LDYVTVHGSG RWNRIPKLTG KTLSTLCTCL RNGKSCRLRW 60 INYLSPNVKR GDFSEEEEDL IIRLHNLLGN RWSLIAGRVP GRTDNQVKNY WNTRLCKKLG 120 FKKQTTKALA SSSETPKAPD SNSKQSCSCG TSSTVKDMEA LQNDQNPLLD DIVAAEDSNS 180 NEEIQWMTEH CAGSLSCSNG HNLISWGMLE FLQGHPLELL YQNFELSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	5e-62	MYB family protein