PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g357850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 269aa MW: 30049.5 Da PI: 4.5635

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g357850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	79.6	5e-25	8	103	1	95
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+l+++C+++C++apyf +e+ +f +h +FGa++++++l+ lp +er a ++++eA+ar dP yG +++ +l + eql+ Pd.00g357850.m01 8 PCGACKFLKQRCKRGCIFAPYFMHEEaITDFSSIHNVFGARKMSRILSMLPMSERAVASWTMTFEAHARDVDPTYGLLNIQAQLDEAHEQLAR 100 7*******************999856************************************************999999999999887 PP DUF260 93 ela 95 +a Pd.00g357850.m01 101 AVA 103 766 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSSRTFNPCG ACKFLKQRCK RGCIFAPYFM HEEAITDFSS IHNVFGARKM SRILSMLPMS 60 ERAVASWTMT FEAHARDVDP TYGLLNIQAQ LDEAHEQLAR AVAPVANPNQ DLENSNEQSE 120 VANPTEQAAV AKPIEFESLS QFSFTHTNNI DNENMNLNYH VSGSYKNTVN IPTKNVADGW 180 DNNEGTSSMS FFDMEWSFED VDELLVDPWC PNMGKVQALT ASTPAADEWL VTERAKAQWK 240 KYKAMVDDAT LKTDISAFGF SCSPQETAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42440.1	4e-32	LBD family protein