PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g358070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 221aa    MW: 25793.7 Da    PI: 10.1813
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g358070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.31.8e-16148216172
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                       +fYn+YA+e+GFsvr  +skks ++ge++++++vC+keg+ + ek+     +r+r + + +C a+l v k+k
  Pd.00g358070.m01 148 DFYNQYAREAGFSVRSYSSKKS-KDGEVIRKEYVCNKEGSWSIEKSG--VVKRRRGVGKESCMARLIVVKSK 216
                       6*****************9999.8889****************9988..7788899999******9987764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MLGNQTSFFF LQRLETFHGP NDVKKKTHHR QLKKKTYHRQ LKNKTHHLCY RVQGKGGQYR  60
GTGVWKLPTG FVDEGEDIFA AAIREVQEET GIFSPVVQPW KLIMAYYFTW KLIRKQILPY  120
QFSILPQVIG ELTPFQGQQF ETLEEVYDFY NQYAREAGFS VRSYSSKKSK DGEVIRKEYV  180
CNKEGSWSIE KSGVVKRRRG VGKESCMARL IVVKSKYGVD M
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12428KKKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-11FAR1 family protein