PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g359800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 102aa    MW: 11204.5 Da    PI: 3.8543
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g359800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26038.92.4e-1226043101
            DUF260  43 lkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
                       +++l+ lp +er  a  ++++eA+ara dP+yGa++ il+lq+q+ + +a+l++++e+l
  Pd.00g359800.m01   2 SRILSMLPMSERAVASWTMTFEAHARAVDPIYGATSYILDLQEQVLNIQAQLDEAHEQL 60 
                       57899999**********************************************99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MSRILSMLPM SERAVASWTM TFEAHARAVD PIYGATSYIL DLQEQVLNIQ AQLDEAHEQL  60
ACAIAPVADP NQDLENSIEQ SEVANPTEQA AVAKTTEFES LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.15e-15LBD family protein