PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g364100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 320aa    MW: 36691.1 Da    PI: 10.1576
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g364100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR195.94.8e-3065152290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkkek+gkw vt++++eHnH+l+
  Pd.00g364100.m01  65 FYDAYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKEHNHPLV 152
                       9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSCKLSKLLG QDLSLKTMDE QSSMSKDEDV IESSNGKDAV TSEGNSDMEP YVGMEFESEE  60
AAKVFYDAYA THLGFIMRVD AFRRSMRDGK VVWRRLVCNK EGFRKTRPKR SENRKPRAIT  120
REGCKAMIVV KKEKSGKWIV TRFVKEHNHP LVVTPANGRR TVLLSQTPDE KDVKIRELMA  180
ELQRERKRSA AYQEQLDMVL REMEEHSNHL SRNIDGFVPL KRNGFFQFSP SYMLWSQKAH  240
GGNGGTVSFV HSITEFPSKS HTSPSWKISE RSISPTPVFL FCLNKPAGAC QSVFSWLLSI  300
TIWWGPWGLS IHFYSRKLRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.18e-90FAR1 family protein