PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g364120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 218aa    MW: 25219.7 Da    PI: 5.2556
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g364120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.77.2e-2751139189
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       +fY+eYA++vGF +r+++ ++s+ +++i +r++ C+k+g+  + +++ +  rr+r++tr gCka++ vk +k+gkw+vt+++++H+H+l
  Pd.00g364120.m01  51 DFYSEYARHVGFIMRIDQCRRSDVDKRILSRRLSCNKQGRYVKPRDQVRPVRRPRPSTREGCKAMMLVKVNKSGKWVVTRVVKDHTHPL 139
                       6***************************************999999999**************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MENGRPRPWL DLLSTDPKPT GAPETSAERD LNAVAEPYVG MEFDSEDAAK DFYSEYARHV  60
GFIMRIDQCR RSDVDKRILS RRLSCNKQGR YVKPRDQVRP VRRPRPSTRE GCKAMMLVKV  120
NKSGKWVVTR VVKDHTHPLI VSSGISMDER DMKIEQLTME LEREDQLCEL YHGLLLTLLD  180
NVEEQTELIS MKVSGIVNDV REFETEVERL PQNELDDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.15e-50FAR1 family protein