PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g366220.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 763aa MW: 85354.4 Da PI: 6.211

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g366220.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.6	6.5e-20	618	714	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++ +W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ + Pd.00g366220.m01 618 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISIPMEDiGTSHVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvK 707 79***********************999999****7777*****777777777777.******************..5558 PP EE..EEE CS B3 89 efelvvk 95 + +++++ Pd.00g366220.m01 708 CNKYMIR 714 8877766 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS 60 STPAPVKSVT SSSTSSSVSS SSSAASWAIL RSDAEEDGER RQQHHHNSYN HRHQYSQADD 120 QGVDAHALSS TASMEISQPS DLGREGGAMD CMGAMETFGY MDLFESNEFF DPSSIFQSDS 180 LLMEQFQQDD DHQQLLALHQ LQDPNEATAI IPQQQQEQEV AVRDEENNKK DDQKENKEPD 240 DMAMVFLEWL RSNRETVSAE DLRSVKIKKS TIECAARRLG GGKEAMKQLL KLVLEWVQTN 300 HLQKRRSNSL TTKDADIVAQ QQQYQDPFQN PNPNTSPRVL ESNPSCSFTQ TPWMAPPPHS 360 AYDHAGGILV PTQPPPPPPA AYPSMMGYIA PDQYVNGPGP YQPSPEYHHM IDSGQPNWPS 420 SPFGMGTAHY GSFPDNNIHL APPPQHHPQA FAGYGSQYQP YQYFPLNGEH QMMRLGSSAT 480 KEARKKRMAR QRRLVSHHRH GHQQQQHLNV QMPDHLLHQQ HTRLVGNAAD LNCANSVPLQ 540 ANPGNWFYWP TATAAPSPSP AMMPSITQEA APPPPVQQMD RPASTQAQNY NQGRSAAQER 600 QERRQGWKSE KNLKFLLQKV LKQSDVGSLG RIVLPKKEAE THLPELEARD GISIPMEDIG 660 TSHVWNMRYR YWPNNKSRMY LLENTGDFVR ANGLQEGDFI VIYSDVKCNK YMIRGVKVRQ 720 AGPKSEGNKR PGKSQRNQHA NTPAGTNGLS PSSASASATH KKQ

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS  60
STPAPVKSVT SSSTSSSVSS SSSAASWAIL RSDAEEDGER RQQHHHNSYN HRHQYSQADD  120
QGVDAHALSS TASMEISQPS DLGREGGAMD CMGAMETFGY MDLFESNEFF DPSSIFQSDS  180
LLMEQFQQDD DHQQLLALHQ LQDPNEATAI IPQQQQEQEV AVRDEENNKK DDQKENKEPD  240
DMAMVFLEWL RSNRETVSAE DLRSVKIKKS TIECAARRLG GGKEAMKQLL KLVLEWVQTN  300
HLQKRRSNSL TTKDADIVAQ QQQYQDPFQN PNPNTSPRVL ESNPSCSFTQ TPWMAPPPHS  360
AYDHAGGILV PTQPPPPPPA AYPSMMGYIA PDQYVNGPGP YQPSPEYHHM IDSGQPNWPS  420
SPFGMGTAHY GSFPDNNIHL APPPQHHPQA FAGYGSQYQP YQYFPLNGEH QMMRLGSSAT  480
KEARKKRMAR QRRLVSHHRH GHQQQQHLNV QMPDHLLHQQ HTRLVGNAAD LNCANSVPLQ  540
ANPGNWFYWP TATAAPSPSP AMMPSITQEA APPPPVQQMD RPASTQAQNY NQGRSAAQER  600
QERRQGWKSE KNLKFLLQKV LKQSDVGSLG RIVLPKKEAE THLPELEARD GISIPMEDIG  660
TSHVWNMRYR YWPNNKSRMY LLENTGDFVR ANGLQEGDFI VIYSDVKCNK YMIRGVKVRQ  720
AGPKSEGNKR PGKSQRNQHA NTPAGTNGLS PSSASASATH KKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-137	B3 family protein