PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g368270.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 366aa MW: 41252.9 Da PI: 7.8919

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g368270.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.6e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++++++ G+g +W + +++ g++R++k+c++rw++yl Pd.00g368270.m01 14 KGPWSPEEDSKLKEYIEKQGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.2	1.7e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g368270.m01 69 GEFSDEEDRIICSLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KQGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC SLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM 120 HMAPPSHHHH HHQRNSLKPP PFPSSSHHNY QNQPLIPSQP LSSLFKDLSS TCNRSFSSGF 180 EIPHLSMTSN NFSNATTNSS LFPTQECLVG SMQVNNYPVK KNSNQNNLLM FGSEGSCSTS 240 SDGSCNQISY DRESNIKQEE MVFQSFDRDQ NNQRFMMLNY GNNNSGCSTG SAGHDHHHVI 300 NQWCERPDGF DHLGTENTLG YCDLEDVKQL ISGGNNLNIS VNGSKSNSLF SNVDENKTEE 360 KVMYFY

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KQGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSDEEDRIIC SLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM  120
HMAPPSHHHH HHQRNSLKPP PFPSSSHHNY QNQPLIPSQP LSSLFKDLSS TCNRSFSSGF  180
EIPHLSMTSN NFSNATTNSS LFPTQECLVG SMQVNNYPVK KNSNQNNLLM FGSEGSCSTS  240
SDGSCNQISY DRESNIKQEE MVFQSFDRDQ NNQRFMMLNY GNNNSGCSTG SAGHDHHHVI  300
NQWCERPDGF DHLGTENTLG YCDLEDVKQL ISGGNNLNIS VNGSKSNSLF SNVDENKTEE  360
KVMYFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-77	MYB family protein