PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g370160.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LFY
Protein Properties Length: 377aa    MW: 42229.3 Da    PI: 8.1413
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g370160.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY583.74.5e-1783036356386
           FLO_LFY  56 kayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsq 146
                        ayGvry+t+akiaelGftv+tL+dm+d eldd+m+sls+ifr+dllvGeryGikaavraerrrl++e+  ++rr+++s d++t  aldalsq
  Pd.00g370160.m01  30 AAYGVRYYTAAKIAELGFTVNTLLDMRDGELDDMMSSLSQIFRWDLLVGERYGIKAAVRAERRRLDDED--SRRRHTVSGDTTTtnALDALSQ 120
                       58*****************************************************************88..8888899888766569****** PP

           FLO_LFY 147 eglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkse..ededeeeeededeeg...sgedge...erqreh 231
                       eglseepvq+eke++gsgg+   ++e+ aa+ +k+   kk+++++k + ++ + +     +d++e  ++d d+++   +g++g    +r+reh
  Pd.00g370160.m01 121 EGLSEEPVQQEKEMVGSGGGA--AWEVEAAAGEKR---KKQRRTRKGQYRNFNGIGGGhnNDHNEGVDNDIDDMNghpNGAGGGllpDRRREH 208
                       *****************9999..666665553222...2222222333333333333322222222233333333233444444677****** PP

           FLO_LFY 232 PfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrr 324
                       PfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iakerGekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr
  Pd.00g370160.m01 209 PFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRR 301
                       ********************************************************************************************* PP

           FLO_LFY 325 afkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
                        fkergenvGawr+acykplvaiaa qgw+ida+fn+hprLsiWYvPtkLr+LCh+er++a+
  Pd.00g370160.m01 302 VFKERGENVGAWREACYKPLVAIAAGQGWEIDAIFNSHPRLSIWYVPTKLRRLCHTERNNAT 363
                       ***********************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MDPDAFSASL FKWDLRGMVV PPSRAQLEAA AYGVRYYTAA KIAELGFTVN TLLDMRDGEL  60
DDMMSSLSQI FRWDLLVGER YGIKAAVRAE RRRLDDEDSR RRHTVSGDTT TTNALDALSQ  120
EGLSEEPVQQ EKEMVGSGGG AAWEVEAAAG EKRKKQRRTR KGQYRNFNGI GGGHNNDHNE  180
GVDNDIDDMN GHPNGAGGGL LPDRRREHPF IVTEPGEVAR GKKNGLDYLF HLYEQCRDFL  240
IQVQNIAKER GEKCPTKVTN QVFRFAKKAG ASYINKPKMR HYVHCYALHC LDEEASNALR  300
RVFKERGENV GAWREACYKP LVAIAAGQGW EIDAIFNSHP RLSIWYVPTK LRRLCHTERN  360
NATASSSASG GGDHLPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-135LFY family protein