PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g373900.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 225aa    MW: 25779.8 Da    PI: 4.4166
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g373900.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.48.2e-34381701128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 
                       lp G+rF+P+++e+vv+yL +k+ +++l++++vike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g++
  Pd.00g373900.m01  38 LPTGYRFDPSEDEIVVYYLFNKILDRELPITDVIKEISVYDHDPDELPNgdfKHGCDCNEAFYFTYTEQIYSSeGKITRRTTKSGYWDLDGEE 130
                       699*********************************************5444444467799********99963677777************* PP

               NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +ev+   ++ +vg  k++vf+kg+ap+g +td +mhe+rl
  Pd.00g373900.m01 131 EEVKYGnGDITVGFEKVMVFHKGTAPNGIETDFIMHEFRL 170
                       ***99746677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MALPSPQSTS QVPETEKDFD LLKCSKIENG KKEADVDLPT GYRFDPSEDE IVVYYLFNKI  60
LDRELPITDV IKEISVYDHD PDELPNGDFK HGCDCNEAFY FTYTEQIYSS EGKITRRTTK  120
SGYWDLDGEE EEVKYGNGDI TVGFEKVMVF HKGTAPNGIE TDFIMHEFRL NPLIVPTHVL  180
NDSIRSKIER YVVCRIIHEG ISNYQPTFKL PPGWTARPVD EGEPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-29NAC family protein