PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g374210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 549aa    MW: 61171.3 Da    PI: 6.038
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g374210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS258.91.8e-791575412374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL  cA a++ g+l+++q+lL  l+elas +gd+++Rlaa+ ++AL ++l++s ++ +++ pp + ++++     ++l  f+evsP++ f 
  Pd.00g374210.m01 157 EQLLNPCALAITGGNLTRVQHLLYVLHELASLTGDANHRLAAHGLRALTQHLSSSAPNGSASAPPVTFASTEPRFFQKSLLKFYEVSPWFAFP 249
                       689*****************************************************************98888888888888*********** PP

              GRAS  95 hltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg..............skeeleetgerLakf 168
                       + +aN+ Il+ +++e    + +Hi+D ++s+G+QWp+Ll+aL+ Rp ++pp ++iT+v++++++                    +   rL  f
  Pd.00g374210.m01 250 NNIANSSILQLIAEEsdrtRNLHIVDVGVSHGMQWPTLLEALTRRPgGPPPLVKITVVSAAANTennqnrenretpfsIGPPGDNFSFRLLGF 342
                       **********999998777889************************55566********98888888766655544444444566778***** PP

              GRAS 169 AeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerfl 258
                       A+ +++++++n l  + l++l+ + ++++++E l+V+++++lh+l    +++++er+e+Lk++++++Pk v+++e+++++   n ++F+++f+
  Pd.00g374210.m01 343 AKFMNINLQINRLDNQPLQNLNAQLIDTSNDELLIVCVQFRLHNLN---HNTPDERTEFLKALRNMEPKGVILSENNMECscnNCGDFATGFS 432
                       ************9999*****************************8...77777889*******************9665446778******* PP

              GRAS 259 ealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyr 350
                       + +ey + ++ds+++ +    + r + Er++++ e+ ++++++g++    +e +ekW er++ +GF    ++e+a +  ++llrk++ ++++r
  Pd.00g374210.m01 433 RQVEYLWRFLDSTSSAF----KGRESDERRVMEGEAAKALTNRGEM----NEGKEKWCERMKGVGFVGQVFGEDAIDGGRALLRKYDsNWEMR 517
                       *************6665....5555556666666699999999998....9************************************9999** PP

              GRAS 351 veeesgslvlgWkdrpLvsvSaWr 374
                       v+e++g++ l Wk++p+ ++S W+
  Pd.00g374210.m01 518 VDEKDGCAGLWWKGQPVSFCSLWK 541
                       ***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    
MTTQEPEPNS TSDHILDWLE DSVTFFPTFL DDPYHSNDIN GLQWWDESHD LIHSNTTSTS  60
LNNLTGIALP TTTRPPDPTN LNQQSPSDSS KKRKVSDDQL IDQKNHVRPI SQAGQGDQLV  120
EEVVVPVKRT NGNKKGAAKT TGNNCNNGNS KEGRWAEQLL NPCALAITGG NLTRVQHLLY  180
VLHELASLTG DANHRLAAHG LRALTQHLSS SAPNGSASAP PVTFASTEPR FFQKSLLKFY  240
EVSPWFAFPN NIANSSILQL IAEESDRTRN LHIVDVGVSH GMQWPTLLEA LTRRPGGPPP  300
LVKITVVSAA ANTENNQNRE NRETPFSIGP PGDNFSFRLL GFAKFMNINL QINRLDNQPL  360
QNLNAQLIDT SNDELLIVCV QFRLHNLNHN TPDERTEFLK ALRNMEPKGV ILSENNMECS  420
CNNCGDFATG FSRQVEYLWR FLDSTSSAFK GRESDERRVM EGEAAKALTN RGEMNEGKEK  480
WCERMKGVGF VGQVFGEDAI DGGRALLRKY DSNWEMRVDE KDGCAGLWWK GQPVSFCSLW  540
KTDVKVSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-166GRAS family protein