PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g375030.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 552aa MW: 64662.6 Da PI: 5.7047

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g375030.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.2	5e-22	181	264	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++++etrtgC a++++++ ++++w+v++++leHnH + Pd.00g375030.m01 181 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTIKEAN-----SRKKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHLF 264 69**************************************99888.....88999****************************77 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MEISATPAPL SSKPHYHSIS GRPCNSPSKS RPLTIVSMAP QKKVNKLDGG WQKKWYGAGI 60 FYEGAEEVEV IQEGSQNSEQ LLENENNDLE NDCEQLFEIE GNEPESERDD TSDQLFDIQS 120 NDHENDGGDI NEHLFEIEGN DHESSRDDRT IIDYQNGGSQ EKAYPPPVVG LEFDSYDDAY 180 NYYNCYAKEL GFAIRVKSSW TKRNSKEKRG AVLCCNCEGF KTIKEANSRK KETRTGCLAM 240 IRLRLVESNR WRVDEVKLEH NHLFDPERAQ NSKSHKRMDS GAKRKMEPTV DVEVRTIKLY 300 RTPVVDAVVL EKKRQEEAHN DFESRELTPM LRTRCYYELQ LSKFYTKDVF LKFQDEVVMM 360 TSCFSITQVH TNGPIVTYMI KEREGEEIMR DNNRNFEVMY DKAGAEVRCM CSCFNLNGYL 420 CRHALCILNY NGVEEIPFQY ILSRWRKDLK RLYVPDLGSN NVDITNPVQW FDHLYRRAMQ 480 VVQEGMISQD HYMVSWQAFK ESLNKEKQER KRPAIYCMNR RVEPRKTAEY REFSEKDLQR 540 CFWHVQEDES CR

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MEISATPAPL SSKPHYHSIS GRPCNSPSKS RPLTIVSMAP QKKVNKLDGG WQKKWYGAGI  60
FYEGAEEVEV IQEGSQNSEQ LLENENNDLE NDCEQLFEIE GNEPESERDD TSDQLFDIQS  120
NDHENDGGDI NEHLFEIEGN DHESSRDDRT IIDYQNGGSQ EKAYPPPVVG LEFDSYDDAY  180
NYYNCYAKEL GFAIRVKSSW TKRNSKEKRG AVLCCNCEGF KTIKEANSRK KETRTGCLAM  240
IRLRLVESNR WRVDEVKLEH NHLFDPERAQ NSKSHKRMDS GAKRKMEPTV DVEVRTIKLY  300
RTPVVDAVVL EKKRQEEAHN DFESRELTPM LRTRCYYELQ LSKFYTKDVF LKFQDEVVMM  360
TSCFSITQVH TNGPIVTYMI KEREGEEIMR DNNRNFEVMY DKAGAEVRCM CSCFNLNGYL  420
CRHALCILNY NGVEEIPFQY ILSRWRKDLK RLYVPDLGSN NVDITNPVQW FDHLYRRAMQ  480
VVQEGMISQD HYMVSWQAFK ESLNKEKQER KRPAIYCMNR RVEPRKTAEY REFSEKDLQR  540
CFWHVQEDES CR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	3e-70	FAR1 family protein