PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g375040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 200aa    MW: 22780.9 Da    PI: 9.4892
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g375040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.68.6e-2360143189
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                       ++Yn YAkevGF+vr+++s  +++++e + + ++Cs +g+++ ++ +     r r+etrtgC a+l++++ ++++w+v ++ leHnH l
  Pd.00g375040.m01  60 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMLRMRLVDSKRWRVLEVTLEHNHLL 143
                       69*****************************************9988.....99*********************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEVASANIEQ VPDGECNEIV IDRDGVLTEL DVQNGVLEGR KEFVAPAVGM EFESYDDAYN  60
YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAML  120
RMRLVDSKRW RVLEVTLEHN HLLGAKIYKS IKKVGSGMKR KSQSSSDAEK RTIKLYRALV  180
IDSGGDGTSN SNPTRYQEFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-67FAR1 family protein